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  5. Zm00001e024509_P001

Zm00001e024509_P001


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024509_P001
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT2G45680 No alias TCP family transcription factor 0.03 Archaeplastida
AT5G23280 No alias TCP family transcription factor 0.04 Archaeplastida
Gb_17362 No alias transcription factor (TCP) 0.05 Archaeplastida
Gb_34229 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os02g42380.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Mp7g09490.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc03g006800.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc03g116320.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e010190_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e015821_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e036117_P001 No alias transcription factor (TCP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 114 259
No external refs found!