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  5. AT3G28420

AT3G28420


Description : Putative membrane lipoprotein


Gene families : OG0027174 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0026756 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0025186 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28420
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
Solyc02g087440.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
BP GO:0002229 defense response to oomycetes IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004124 cysteine synthase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004844 uracil DNA N-glycosylase activity IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood
CC GO:0005697 telomerase holoenzyme complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
CC GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing) IEP Neighborhood
BP GO:0009403 toxin biosynthetic process IEP Neighborhood
BP GO:0009682 induced systemic resistance IEP Neighborhood
BP GO:0009700 indole phytoalexin biosynthetic process IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
MF GO:0009917 sterol 5-alpha reductase activity IEP Neighborhood
CC GO:0009925 basal plasma membrane IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010117 photoprotection IEP Neighborhood
BP GO:0010120 camalexin biosynthetic process IEP Neighborhood
BP GO:0010206 photosystem II repair IEP Neighborhood
BP GO:0010268 brassinosteroid homeostasis IEP Neighborhood
BP GO:0010338 leaf formation IEP Neighborhood
BP GO:0010358 leaf shaping IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0030091 protein repair IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0032206 positive regulation of telomere maintenance IEP Neighborhood
BP GO:0032210 regulation of telomere maintenance via telomerase IEP Neighborhood
BP GO:0032212 positive regulation of telomere maintenance via telomerase IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
CC GO:0045177 apical part of cell IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
BP GO:0046217 indole phytoalexin metabolic process IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0048232 male gamete generation IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048826 cotyledon morphogenesis IEP Neighborhood
MF GO:0050213 progesterone 5-alpha-reductase activity IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0052314 phytoalexin metabolic process IEP Neighborhood
BP GO:0052315 phytoalexin biosynthetic process IEP Neighborhood
BP GO:0052317 camalexin metabolic process IEP Neighborhood
BP GO:0055088 lipid homeostasis IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
MF GO:0097506 deaminated base DNA N-glycosylase activity IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1904356 regulation of telomere maintenance via telomere lengthening IEP Neighborhood
BP GO:1904358 positive regulation of telomere maintenance via telomere lengthening IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000278 regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2000573 positive regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!