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  5. Zm00001e024743_P001

Zm00001e024743_P001


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024743_P001
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00393p00013250 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.06 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.03 Archaeplastida
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.05 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.02 Archaeplastida
GSVIVT01020616001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 Archaeplastida
GSVIVT01025167001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01025660001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01025663001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
GSVIVT01025671001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
Gb_04299 No alias Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g06580.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os02g20540.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os02g20560.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os04g39600.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os05g07060.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os08g39270.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os09g30486.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Solyc06g075220.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Solyc07g048090.2.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g007650.3.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Solyc09g007660.1.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Solyc11g069250.2.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 52 188
No external refs found!