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  5. AT3G28650

AT3G28650


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0001348 (Archaeplastida) Phylogenetic Tree(s): OG0001348_tree ,
OG_05_0000867 (LandPlants) Phylogenetic Tree(s): OG_05_0000867_tree ,
OG_06_0000460 (SeedPlants) Phylogenetic Tree(s): OG_06_0000460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28650
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT1G69150 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 Archaeplastida
AT2G04680 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT3G07000 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT4G13992 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT5G22355 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G29624 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G42840 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT5G54030 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 Archaeplastida
AT5G59930 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0019852 L-ascorbic acid metabolic process IEP Neighborhood
BP GO:0019853 L-ascorbic acid biosynthetic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0048578 positive regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
MF GO:0050105 L-gulonolactone oxidase activity IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
InterPro domains Description Start Stop
IPR004146 DC1 290 337
IPR004146 DC1 60 108
IPR004146 DC1 373 419
IPR004146 DC1 237 280
IPR004146 DC1 538 586
IPR004146 DC1 175 223
IPR004146 DC1 7 48
No external refs found!