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  5. Zm00001e024925_P001

Zm00001e024925_P001


Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 114.0)


Gene families : OG0001122 (Archaeplastida) Phylogenetic Tree(s): OG0001122_tree ,
OG_05_0000683 (LandPlants) Phylogenetic Tree(s): OG_05_0000683_tree ,
OG_06_0000651 (SeedPlants) Phylogenetic Tree(s): OG_06_0000651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024925_P001
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00185500 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01012688001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01012691001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g01970.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp5g00910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g00950.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g080830.1.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g080850.1.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 86 414
No external refs found!