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  5. Zm00001e024936_P001

Zm00001e024936_P001


Description : no hits & (original description: none)


Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024936_P001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
ATCG00830 RPL2.1 ribosomal protein L2 0.05 Archaeplastida
ATCG01310 RPL2.2 ribosomal protein L2 0.05 Archaeplastida
Gb_17475 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 Archaeplastida
Gb_24024 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 Archaeplastida
Gb_25047 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 Archaeplastida
Mp1g19370.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo137825 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Solyc00g500036.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc00g500080.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc00g500298.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc09g050067.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Solyc10g018610.2.1 No alias No annotation 0.03 Archaeplastida
Zm00001e042122_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.03 Archaeplastida
Zm00001e042133_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004107 chorismate synthase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!