1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e025044_P001

Zm00001e025044_P001


Description : no hits & (original description: none)


Gene families : OG0000902 (Archaeplastida) Phylogenetic Tree(s): OG0000902_tree ,
OG_05_0002793 (LandPlants) Phylogenetic Tree(s): OG_05_0002793_tree ,
OG_06_0007321 (SeedPlants) Phylogenetic Tree(s): OG_06_0007321_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025044_P001
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AT1G21700 CHB4, SWI3C, ATSWI3C SWITCH/sucrose nonfermenting 3C 0.02 Archaeplastida
Cre08.g364050 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01008831001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
GSVIVT01031951001 No alias Chromatin organisation.chromatin remodeling... 0.04 Archaeplastida
LOC_Os02g10060.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
LOC_Os04g40420.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Mp8g15610.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Solyc04g082760.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!