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  5. Zm00001e025234_P001

Zm00001e025234_P001


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025234_P001
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.08 Archaeplastida
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.07 Archaeplastida
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.03 Archaeplastida
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.04 Archaeplastida
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.04 Archaeplastida
Cre02.g112750 No alias RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
GSVIVT01003836001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01008556001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01018205001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
GSVIVT01021087001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01032239001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01033064001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Gb_00228 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_03921 No alias transcription factor (SBP) 0.04 Archaeplastida
Gb_03922 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.04 Archaeplastida
Gb_22010 No alias transcription factor (SBP) 0.04 Archaeplastida
Gb_26599 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_32703 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_38013 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_38014 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_41517 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os01g69830.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.01 Archaeplastida
LOC_Os02g08070.1 No alias transcription factor (SBP) 0.06 Archaeplastida
LOC_Os04g46580.1 No alias transcription factor (SBP) 0.05 Archaeplastida
LOC_Os04g56170.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os06g44860.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os06g49010.4 No alias transcription factor (SBP) 0.06 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.06 Archaeplastida
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.05 Archaeplastida
LOC_Os08g41940.1 No alias transcription factor (SBP) 0.05 Archaeplastida
LOC_Os09g31438.1 No alias transcription factor (SBP) 0.06 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.08 Archaeplastida
LOC_Os11g30370.1 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_10429891g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_10435426g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_15381g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_20537g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_7789506g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.06 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.05 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.05 Archaeplastida
Pp3c25_8630V3.1 No alias squamosa promoter binding protein-like 2 0.05 Archaeplastida
Smo79699 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.06 Archaeplastida
Solyc10g078700.3.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc12g038520.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006686_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e010067_P001 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e010124_P002 No alias transcription factor (SBP) 0.01 Archaeplastida
Zm00001e010443_P001 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e013795_P002 No alias transcription factor (SBP) 0.07 Archaeplastida
Zm00001e021425_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e021962_P003 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e021967_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e025110_P001 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e034537_P001 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e035060_P002 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e041526_P001 No alias transcription factor (SBP) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 162 235
No external refs found!