1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e025557_P001

Zm00001e025557_P001


Description : Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana (sp|q9fma1|pp433_arath : 390.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025557_P001

Target Alias Description ECC score Gene Family Method Actions
Gb_33070 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
LOC_Os01g40720.1 No alias RNA editing factor (MEF7) 0.04 Archaeplastida
LOC_Os05g49740.1 No alias Pentatricopeptide repeat-containing protein At5g39680... 0.06 Archaeplastida
LOC_Os06g40860.1 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.04 Archaeplastida
LOC_Os07g19400.1 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.01 Archaeplastida
LOC_Os07g20420.1 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 Archaeplastida
LOC_Os08g04400.1 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.04 Archaeplastida
LOC_Os10g30590.1 No alias Pentatricopeptide repeat-containing protein At5g08305... 0.11 Archaeplastida
LOC_Os12g06070.1 No alias Pentatricopeptide repeat-containing protein At5g04780,... 0.07 Archaeplastida
Smo109283 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Smo328 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 Archaeplastida
Smo79648 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 274 322
IPR002885 Pentatricopeptide_repeat 117 142
IPR002885 Pentatricopeptide_repeat 145 175
IPR002885 Pentatricopeptide_repeat 176 206
IPR002885 Pentatricopeptide_repeat 349 373
No external refs found!