Description : transcription factor (bHLH)
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e025656_P001 | |
Cluster | HCCA: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00265010 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
AMTR_s00024p00250370 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
AMTR_s00066p00183410 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
AT1G09530 | PIF3, POC1, PAP3 | phytochrome interacting factor 3 | 0.03 | Archaeplastida | |
AT1G27740 | RSL4 | root hair defective 6-like 4 | 0.06 | Archaeplastida | |
AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.03 | Archaeplastida | |
AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.03 | Archaeplastida | |
AT2G46970 | PIL1 | phytochrome interacting factor 3-like 1 | 0.04 | Archaeplastida | |
AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
AT3G59060 | PIL6, PIF5 | phytochrome interacting factor 3-like 6 | 0.03 | Archaeplastida | |
AT4G00120 | GT140, IND1, IND, EDA33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.05 | Archaeplastida | |
AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
GSVIVT01018164001 | No alias | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01018165001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
GSVIVT01020814001 | No alias | External stimuli response.light.red/far red light.PIF... | 0.02 | Archaeplastida | |
GSVIVT01028238001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
GSVIVT01028516001 | No alias | External stimuli response.light.red/far red light.PIF... | 0.02 | Archaeplastida | |
Gb_07156 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.02 | Archaeplastida | |
Gb_30839 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
LOC_Os01g02110.1 | No alias | transcription factor (bHLH) | 0.1 | Archaeplastida | |
LOC_Os03g10770.1 | No alias | transcription factor (bHLH) | 0.14 | Archaeplastida | |
LOC_Os03g42100.1 | No alias | transcription factor (bHLH) | 0.08 | Archaeplastida | |
LOC_Os06g10820.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
LOC_Os06g47980.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os07g05010.2 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.04 | Archaeplastida | |
LOC_Os07g39940.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
LOC_Os09g28210.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
LOC_Os11g41640.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
LOC_Os12g39850.1 | No alias | transcription factor (bHLH) | 0.12 | Archaeplastida | |
LOC_Os12g40730.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
MA_100071g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_10156436g0010 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
MA_29441g0010 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
MA_83500g0010 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
MA_88831g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Mp5g09710.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Pp3c16_21590V3.1 | No alias | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.03 | Archaeplastida | |
Pp3c17_21890V3.1 | No alias | phytochrome interacting factor 3 | 0.02 | Archaeplastida | |
Pp3c25_13740V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
Pp3c3_28970V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
Smo409967 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | Archaeplastida | |
Smo413232 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | Archaeplastida | |
Solyc01g102300.3.1 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.02 | Archaeplastida | |
Solyc01g107140.3.1 | No alias | transcription factor (bHLH) | 0.09 | Archaeplastida | |
Solyc02g091440.2.1 | No alias | transcription factor (bHLH) | 0.12 | Archaeplastida | |
Solyc03g044460.1.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Solyc04g077960.1.1 | No alias | transcription factor (bHLH) | 0.09 | Archaeplastida | |
Solyc06g069600.3.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Solyc11g005780.3.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
Solyc12g088380.1.1 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
Zm00001e017430_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
Zm00001e018003_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
Zm00001e040380_P002 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005576 | extracellular region | IEP | Neighborhood |
CC | GO:0005618 | cell wall | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Neighborhood |
MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
MF | GO:0045735 | nutrient reservoir activity | IEP | Neighborhood |
MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
CC | GO:0048046 | apoplast | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011598 | bHLH_dom | 244 | 284 |
No external refs found! |