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  5. Zm00001e025725_P001

Zm00001e025725_P001


Description : Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 414.3) & Endonuclease 4 OS=Arabidopsis thaliana (sp|f4jjl0|endo4_arath : 338.0)


Gene families : OG0001168 (Archaeplastida) Phylogenetic Tree(s): OG0001168_tree ,
OG_05_0001313 (LandPlants) Phylogenetic Tree(s): OG_05_0001313_tree ,
OG_06_0001292 (SeedPlants) Phylogenetic Tree(s): OG_06_0001292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025725_P001
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT1G11190 BFN1, ENDO1 bifunctional nuclease i 0.04 Archaeplastida
GSVIVT01011882001 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.04 Archaeplastida
Gb_25885 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.03 Archaeplastida
LOC_Os01g03730.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.11 Archaeplastida
LOC_Os04g55850.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.03 Archaeplastida
Solyc02g078910.3.1 No alias Endonuclease 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e006716_P003 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004519 endonuclease activity IEA Interproscan
BP GO:0006308 DNA catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 30 288
No external refs found!