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  5. Zm00001e025803_P001

Zm00001e025803_P001


Description : IDN/IDP regulatory protein of DNA methylation pathway


Gene families : OG0000867 (Archaeplastida) Phylogenetic Tree(s): OG0000867_tree ,
OG_05_0000555 (LandPlants) Phylogenetic Tree(s): OG_05_0000555_tree ,
OG_06_0015321 (SeedPlants) Phylogenetic Tree(s): OG_06_0015321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025803_P001
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT1G80790 No alias XH/XS domain-containing protein 0.04 Archaeplastida
AT3G12550 No alias XH/XS domain-containing protein 0.1 Archaeplastida
AT3G48670 RDM12, IDN2 XH/XS domain-containing protein 0.04 Archaeplastida
AT4G00380 No alias XH/XS domain-containing protein 0.05 Archaeplastida
AT5G59390 No alias XH/XS domain-containing protein 0.08 Archaeplastida
GSVIVT01010889001 No alias Chromatin organisation.DNA methylation.canonical... 0.07 Archaeplastida
GSVIVT01016528001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 Archaeplastida
Gb_04143 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 Archaeplastida
LOC_Os01g05470.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.11 Archaeplastida
LOC_Os01g44230.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.1 Archaeplastida
Mp6g07340.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 Archaeplastida
Solyc03g117040.3.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.07 Archaeplastida
Solyc06g051810.4.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.09 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0031047 gene silencing by RNA IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080009 mRNA methylation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005379 Uncharacterised_XH 558 687
IPR005381 Znf-XS_domain 64 107
IPR005380 XS_domain 170 281
No external refs found!