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  5. Zm00001e026160_P001

Zm00001e026160_P001


Description : Polygalacturonase At1g48100 OS=Arabidopsis thaliana (sp|q949z1|pglr4_arath : 413.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 189.6)


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000636 (LandPlants) Phylogenetic Tree(s): OG_05_0000636_tree ,
OG_06_0002274 (SeedPlants) Phylogenetic Tree(s): OG_06_0002274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026160_P001
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00197210 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AMTR_s00003p00198650 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AMTR_s00090p00047840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT1G05650 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT1G10640 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G56710 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G80170 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.03 Archaeplastida
AT2G43870 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.05 Archaeplastida
GSVIVT01004007001 No alias Polygalacturonase OS=Prunus persica 0.04 Archaeplastida
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.03 Archaeplastida
GSVIVT01028189001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os01g44970.1 No alias polygalacturonase (PGX1) 0.03 Archaeplastida
LOC_Os05g46510.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os11g14410.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
MA_10862g0010 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 Archaeplastida
MA_9231294g0010 No alias No annotation 0.04 Archaeplastida
Smo113633 No alias Polygalacturonase ADPG1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g100980.4.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g067630.3.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Solyc02g067640.3.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Solyc03g113230.3.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g019130.3.1 No alias Polygalacturonase OS=Prunus persica... 0.04 Archaeplastida
Zm00001e013553_P001 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e032294_P001 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 126 454
No external refs found!