1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e026240_P001

Zm00001e026240_P001


Description : Polygalacturonase At1g48100 OS=Arabidopsis thaliana (sp|q949z1|pglr4_arath : 483.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 186.0)


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000636 (LandPlants) Phylogenetic Tree(s): OG_05_0000636_tree ,
OG_06_0002274 (SeedPlants) Phylogenetic Tree(s): OG_06_0002274_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026240_P001
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.03 Archaeplastida
AT5G14650 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01033359001 No alias Cell wall.pectin.modification and... 0.04 Archaeplastida
Gb_13356 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os01g19170.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.14 Archaeplastida
LOC_Os01g66710.1 No alias Polygalacturonase OS=Prunus persica... 0.06 Archaeplastida
LOC_Os03g59330.1 No alias polygalacturonase (QRT2) 0.03 Archaeplastida
LOC_Os05g46510.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
MA_10431579g0010 No alias Polygalacturonase OS=Cryptomeria japonica... 0.02 Archaeplastida
MA_10862g0010 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.01 Archaeplastida
Pp3c23_3890V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Smo78038 No alias Cell wall.pectin.modification and... 0.02 Archaeplastida
Solyc01g087280.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g067630.3.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
Solyc04g025440.3.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g015870.4.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g019220.1.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Zm00001e026600_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 396 716
No external refs found!