Zm00001e026533_P001

Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex

Gene families : OG0001875 (Archaeplastida) Phylogenetic Tree(s): OG0001875_tree ,
OG_05_0001802 (LandPlants) Phylogenetic Tree(s): OG_05_0001802_tree ,
OG_06_0001679 (SeedPlants) Phylogenetic Tree(s): OG_06_0001679_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e026533_P001
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00022075.61	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	14	38
IPR000571	Znf_CCCH	150	174
IPR000504	RRM_dom	83	139

External Links

No external refs found!