Zm00001e026573_P001

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e026573_P001
Cluster	HCCA: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00057p00191330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G53170	ATERF8, ATERF-8, ERF8	ethylene response factor 8	0.04	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.03	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.02	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G47220	ERF2, ATERF2, ATERF-2	ethylene responsive element binding factor 2	0.03	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01010629001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013914001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.04	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_19118	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_37188	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_41433	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
LOC_Os03g22170.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g34730.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g09390.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.06	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_10003489g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_162045g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_18403g0020	No alias	Ethylene-responsive transcription factor RAP2-4...	0.09	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.07	Archaeplastida
MA_2446g0010	No alias	Ethylene-responsive transcription factor ERF053...	0.05	Archaeplastida
MA_40338g0010	No alias	Ethylene-responsive transcription factor ERF012...	0.05	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_7850076g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp4g22290.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c10_20000V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.03	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c5_880V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
Smo409196	No alias	External stimuli response.biotic...	0.02	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc03g116610.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.07	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g068830.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e006692_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.1	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e018522_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023157_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	109	158

External Links

No external refs found!

Zm00001e026573_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation