AT3G30820

Description : Arabidopsis retrotransposon ORF-1 protein

Gene families : OG0017638 (Archaeplastida) Phylogenetic Tree(s): OG0017638_tree ,
OG_05_0017415 (LandPlants) Phylogenetic Tree(s): OG_05_0017415_tree ,
OG_06_0016949 (SeedPlants) Phylogenetic Tree(s): OG_06_0016949_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G30820
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G14000	No alias	Arabidopsis retrotransposon ORF-1 protein	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004312	ATHILA_Orf1	94	153

External Links

No external refs found!