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  5. Zm00001e026658_P003

Zm00001e026658_P003


Description : Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica (sp|q76c99|rf1_orysi : 840.0)


Gene families : OG0001482 (Archaeplastida) Phylogenetic Tree(s): OG0001482_tree ,
OG_05_0000870 (LandPlants) Phylogenetic Tree(s): OG_05_0000870_tree ,
OG_06_0000537 (SeedPlants) Phylogenetic Tree(s): OG_06_0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026658_P003
Cluster HCCA: Cluster_697

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g01640.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os08g01650.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os08g15000.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os10g35436.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os10g35440.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Smo51561 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.02 Archaeplastida
Zm00001e011263_P001 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.17 Archaeplastida
Zm00001e011267_P001 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.17 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 127 173
IPR002885 Pentatricopeptide_repeat 198 247
IPR002885 Pentatricopeptide_repeat 513 560
IPR002885 Pentatricopeptide_repeat 622 667
IPR002885 Pentatricopeptide_repeat 408 457
IPR002885 Pentatricopeptide_repeat 272 317
IPR002885 Pentatricopeptide_repeat 587 615
IPR002885 Pentatricopeptide_repeat 483 510
IPR002885 Pentatricopeptide_repeat 377 406
IPR002885 Pentatricopeptide_repeat 342 371
IPR002885 Pentatricopeptide_repeat 691 721
No external refs found!