1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e026660_P001

Zm00001e026660_P001


Description : Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica (sp|q76c99|rf1_orysi : 851.0)


Gene families : OG0001482 (Archaeplastida) Phylogenetic Tree(s): OG0001482_tree ,
OG_05_0000870 (LandPlants) Phylogenetic Tree(s): OG_05_0000870_tree ,
OG_06_0000537 (SeedPlants) Phylogenetic Tree(s): OG_06_0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026660_P001
Cluster HCCA: Cluster_697

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g15000.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os10g35436.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os10g35440.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Smo51561 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.02 Archaeplastida
Zm00001e011263_P001 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.11 Archaeplastida
Zm00001e011267_P001 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 325 374
IPR002885 Pentatricopeptide_repeat 395 440
IPR002885 Pentatricopeptide_repeat 640 687
IPR002885 Pentatricopeptide_repeat 749 794
IPR002885 Pentatricopeptide_repeat 254 300
IPR002885 Pentatricopeptide_repeat 535 584
IPR002885 Pentatricopeptide_repeat 610 637
IPR002885 Pentatricopeptide_repeat 469 498
IPR002885 Pentatricopeptide_repeat 504 533
IPR002885 Pentatricopeptide_repeat 818 848
IPR002885 Pentatricopeptide_repeat 714 742
No external refs found!