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  5. Zm00001e026840_P001

Zm00001e026840_P001


Description : LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026840_P001
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.03 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.06 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Gb_10910 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_27021 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g08470.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Smo134330 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.02 Archaeplastida
Solyc12g006980.2.1 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e016681_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e030216_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 126 183
No external refs found!