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Description : mRNA-binding regulatory factor (TZF)
Gene families : OG0001103 (Archaeplastida) Phylogenetic Tree(s): OG0001103_tree ,
OG_05_0000849 (LandPlants) Phylogenetic Tree(s): OG_05_0000849_tree ,
OG_06_0000726 (SeedPlants) Phylogenetic Tree(s): OG_06_0000726_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e027132_P001 | |
| Cluster | HCCA: Cluster_256 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G19810 | No alias | CCCH-type zinc finger family protein | 0.05 | Archaeplastida | |
| AT4G29190 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.03 | Archaeplastida | |
| GSVIVT01013901001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | Archaeplastida | |
| LOC_Os01g53650.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.04 | Archaeplastida | |
| LOC_Os05g10670.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida | |
| LOC_Os05g45020.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | Archaeplastida | |
| Solyc07g053750.1.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida | |
| Zm00001e016582_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.08 | Archaeplastida | |
| Zm00001e032199_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | Archaeplastida | |
| Zm00001e035805_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000571 | Znf_CCCH | 114 | 135 |
| No external refs found! |