Zm00001e027157_P001


Description : transcription factor (bHLH)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027157_P001
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00103240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00029p00092220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01037903001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_21995 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_26693 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_33415 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g57580.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os02g17680.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
LOC_Os03g55220.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
LOC_Os05g14010.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g42180.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp2g19970.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc01g150101.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g079760.3.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
Solyc03g031450.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g066580.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e032055_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!