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  5. Zm00001e027318_P001

Zm00001e027318_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027318_P001
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00221530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020710.73 No alias No description available 0.01 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_01374 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.04 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Pp3c20_11890V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_14670V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_23200V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 143 190
IPR001005 SANT/Myb 46 97
No external refs found!