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  5. Zm00001e027333_P001

Zm00001e027333_P001


Description : component EDL of SCF E3 ubiquitin ligase complex


Gene families : OG0003185 (Archaeplastida) Phylogenetic Tree(s): OG0003185_tree ,
OG_05_0002156 (LandPlants) Phylogenetic Tree(s): OG_05_0002156_tree ,
OG_06_0001612 (SeedPlants) Phylogenetic Tree(s): OG_06_0001612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027333_P001
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT3G63060 EDL3 EID1-like 3 0.09 Archaeplastida
GSVIVT01011098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
LOC_Os05g41490.1 No alias component EDL of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
Solyc06g084320.1.1 No alias component EDL of SCF E3 ubiquitin ligase complex 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 56 95
No external refs found!