1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e027336_P001

Zm00001e027336_P001


Description : cyclin (CYCB)


Gene families : OG0000492 (Archaeplastida) Phylogenetic Tree(s): OG0000492_tree ,
OG_05_0000357 (LandPlants) Phylogenetic Tree(s): OG_05_0000357_tree ,
OG_06_0000555 (SeedPlants) Phylogenetic Tree(s): OG_06_0000555_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027336_P001
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.09 Archaeplastida
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
AT1G16330 CYCB3;1 cyclin b3;1 0.05 Archaeplastida
AT1G20610 CYCB2;3 Cyclin B2;3 0.05 Archaeplastida
AT1G76310 CYCB2;4 CYCLIN B2;4 0.05 Archaeplastida
AT2G17620 CYCB2;1 Cyclin B2;1 0.04 Archaeplastida
AT2G26760 CYCB1;4 Cyclin B1;4 0.03 Archaeplastida
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.06 Archaeplastida
AT4G35620 CYCB2;2 Cyclin B2;2 0.06 Archaeplastida
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000769.38 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 Archaeplastida
Cre08.g370401 No alias Cyclin-B2-2 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 Archaeplastida
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 Archaeplastida
Gb_03506 No alias cyclin (CYCB) 0.03 Archaeplastida
Gb_10664 No alias cyclin (CYCB) 0.03 Archaeplastida
Gb_27795 No alias G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.03 Archaeplastida
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.12 Archaeplastida
LOC_Os04g47580.1 No alias cyclin (CYCB) 0.14 Archaeplastida
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.1 Archaeplastida
LOC_Os06g51110.2 No alias cyclin (CYCB) 0.13 Archaeplastida
MA_10393012g0020 No alias G2/mitotic-specific cyclin-2 OS=Antirrhinum majus... 0.03 Archaeplastida
MA_10428837g0030 No alias cyclin (CYCB) 0.06 Archaeplastida
MA_10433093g0020 No alias Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.04 Archaeplastida
MA_19215g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_311439g0010 No alias cyclin (CYCB) 0.02 Archaeplastida
MA_738195g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp5g10030.1 No alias cyclin (CYCB) 0.06 Archaeplastida
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.06 Archaeplastida
Pp3c9_18910V3.1 No alias CYCLIN B2;4 0.04 Archaeplastida
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 Archaeplastida
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.05 Archaeplastida
Solyc02g082820.3.1 No alias cyclin (CYCB) 0.03 Archaeplastida
Solyc03g032190.3.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Solyc04g082430.3.1 No alias cyclin (CYCB) 0.03 Archaeplastida
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 191 316
IPR004367 Cyclin_C-dom 318 437
No external refs found!