Zm00001e027415_P001


Description : transcription factor (AS2/LOB)


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0062505 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027415_P001
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00088960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AT1G67100 LBD40 LOB domain-containing protein 40 0.07 Archaeplastida
AT3G02550 LBD41 LOB domain-containing protein 41 0.1 Archaeplastida
AT5G67420 LBD37, ASL39 LOB domain-containing protein 37 0.03 Archaeplastida
GSVIVT01008284001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.09 Archaeplastida
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.12 Archaeplastida
Gb_36943 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g20800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g32770.1 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
LOC_Os03g33090.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_223267g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g085910.4.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc03g119530.3.1 No alias transcription factor (AS2/LOB) 0.12 Archaeplastida
Zm00001e005129_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 21 119
No external refs found!