Zm00001e027439_P001

Description : transcription factor (GATA)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027439_P001
Cluster	HCCA: Cluster_269

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00242860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT2G28340	GATA13	GATA transcription factor 13	0.05	Archaeplastida
AT3G60530	GATA4	GATA transcription factor 4	0.02	Archaeplastida
AT5G26930	GATA23	GATA transcription factor 23	0.03	Archaeplastida
GSVIVT01018833001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01035048001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
Gb_13387	No alias	transcription factor (GATA)	0.02	Archaeplastida
Gb_24250	No alias	transcription factor (GATA)	0.02	Archaeplastida
Gb_25568	No alias	transcription factor (GATA)	0.04	Archaeplastida
LOC_Os01g54210.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os02g56250.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os03g05160.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os04g45650.2	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os12g07120.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
MA_10436047g0010	No alias	transcription factor (GATA)	0.03	Archaeplastida
MA_44185g0010	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc01g090760.4.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc04g015360.3.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc08g066510.3.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc10g018560.2.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e005940_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e016165_P001	No alias	transcription factor (GATA)	0.04	Archaeplastida
Zm00001e039468_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005811	lipid droplet	IEP	Neighborhood
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	250	283

External Links

No external refs found!

Zm00001e027439_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation