1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e027602_P005

Zm00001e027602_P005


Description : RSZ32/33 RNA splicing factor


Gene families : OG0002802 (Archaeplastida) Phylogenetic Tree(s): OG0002802_tree ,
OG_05_0002795 (LandPlants) Phylogenetic Tree(s): OG_05_0002795_tree ,
OG_06_0003143 (SeedPlants) Phylogenetic Tree(s): OG_06_0003143_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027602_P005
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00189640 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
Cpa|evm.model.tig00000802.14 No alias No description available 0.01 Archaeplastida
Gb_27277 No alias RSZ32/33 RNA splicing factor 0.05 Archaeplastida
Gb_30496 No alias RSZ32/33 RNA splicing factor 0.02 Archaeplastida
LOC_Os01g06290.1 No alias RSZ32/33 RNA splicing factor 0.06 Archaeplastida
LOC_Os05g02880.1 No alias RSZ32/33 RNA splicing factor 0.04 Archaeplastida
LOC_Os05g07000.1 No alias RSZ32/33 RNA splicing factor 0.02 Archaeplastida
Mp6g01120.1 No alias RSZ32/33 RNA splicing factor 0.03 Archaeplastida
Solyc05g054920.4.1 No alias RSZ32/33 RNA splicing factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 74
IPR001878 Znf_CCHC 103 118
IPR001878 Znf_CCHC 124 140
No external refs found!