GO:0044260 cellular macromolecule metabolic process None Extended BP GO:0044271 cellular nitrogen compound biosynthetic process None Extended BP GO:0044419 interspecies interaction between organisms None Extended CC GO:0044422 organelle part None Extended CC GO:0044424 intracellular part None Extended CC GO:0044427 chromosomal part None Extended CC GO:0044428 nuclear part None Extended CC GO:0044446 intracellular organelle part None Extended CC GO:0044451 nucleoplasm part None Extended CC GO:0044454 nuclear chromosome part None Extended CC GO:0044464 cell part None Extended BP GO:0044728 DNA methylation or demethylation None Extended BP GO:0045087 innate immune response None Extended BP GO:0045814 negative regulation of gene expression, epigenetic None Extended BP GO:0045892 negative regulation of transcription, DNA-templated None Extended BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process None Extended BP GO:0046483 heterocycle metabolic process None Extended BP GO:0048439 flower morphogenesis RCA Interproscan BP GO:0048519 negative regulation of biological process RCA Interproscan BP GO:0048523 negative regulation of cellular process None Extended BP GO:0050789 regulation of biological process None Extended BP GO:0050794 regulation of cellular process None Extended BP GO:0050896 response to stimulus None Extended BP GO:0051171 regulation of nitrogen compound metabolic process None Extended BP GO:0051172 negative regulation of nitrogen compound metabolic process None Extended BP GO:0051252 regulation of RNA metabolic process None Extended BP GO:0051253 negative regulation of RNA metabolic process None Extended BP GO:0051607 defense response to virus None Extended BP GO:0051701 interaction with host None Extended BP GO:0051704 multi-organism process None Extended BP GO:0051707 response to other organism None Extended BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction None Extended BP GO:0052018 modulation by symbiont of RNA levels in host None Extended BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction None Extended BP GO:0060255 regulation of macromolecule metabolic process None Extended BP GO:0065007 biological regulation None Extended BP GO:0070918 production of small RNA involved in gene silencing by RNA None Extended BP GO:0071704 organic substance metabolic process None Extended BP GO:0071840 cellular component organization or biogenesis None Extended BP GO:0080090 regulation of primary metabolic process None Extended BP GO:0090304 nucleic acid metabolic process None Extended BP GO:0090698 post-embryonic plant morphogenesis None Extended BP GO:0097659 nucleic acid-templated transcription None Extended BP GO:0098542 defense response to other organism None Extended BP GO:0098586 cellular response to virus None Extended MF GO:0140110 transcription regulator activity None Extended BP GO:1901360 organic cyclic compound metabolic process None Extended BP GO:1901362 organic cyclic compound biosynthetic process None Extended BP GO:1901576 organic substance biosynthetic process None Extended BP GO:1902679 negative regulation of RNA biosynthetic process None Extended BP GO:1903506 regulation of nucleic acid-templated transcription None Extended BP GO:1903507 negative regulation of nucleic acid-templated transcription None Extended BP GO:2000112 regulation of cellular macromolecule biosynthetic process None Extended BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process None Extended BP GO:2001141 regulation of RNA biosynthetic process None Extended
Toggle parental
Zm00001e027635_P001 details
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000418 RNA polymerase IV complex IEP Neighborhood
CC GO:0000419 RNA polymerase V complex IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
CC GO:0000815 ESCRT III complex IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0000913 preprophase band assembly IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
CC GO:0001673 male germ cell nucleus IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005673 transcription factor TFIIE complex IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
CC GO:0005730 nucleolus
  • BLAST
  • Zm00001e027635_P001


    Description : RING-HC-class E3 ligase


    Gene families : OG0001840 (Archaeplastida) Phylogenetic Tree(s): OG0001840_tree ,
    OG_05_0001934 (LandPlants) Phylogenetic Tree(s): OG_05_0001934_tree ,
    OG_06_0004532 (SeedPlants) Phylogenetic Tree(s): OG_06_0004532_tree

    Sequence : coding (download), protein (download)


    Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


    Type Description Actions
    Neighborhood HRR: Zm00001e027635_P001
    Cluster HCCA: Cluster_254

    Target Alias Description ECC score Gene Family Method Actions
    Zm00001e001220_P001 No alias RING-HC-class E3 ligase 0.04 Archaeplastida

    Type GO Term Name Evidence Source
    MF GO:0005515 protein binding IEA Interproscan
    Type GO Term Name Evidence Source
    MF GO:0003676 nucleic acid binding IEP Neighborhood
    MF GO:0003677 DNA binding IEP Neighborhood
    MF GO:0005524 ATP binding IEP Neighborhood
    BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
    BP GO:0006694 steroid biosynthetic process IEP Neighborhood
    MF GO:0008144 drug binding IEP Neighborhood
    BP GO:0008202 steroid metabolic process IEP Neighborhood
    BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
    BP GO:0010468 regulation of gene expression IEP Neighborhood
    BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
    MF GO:0016462 pyrophosphatase activity IEP Neighborhood
    MF GO:0016740 transferase activity IEP Neighborhood
    MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
    MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
    MF GO:0016887 ATPase activity IEP Neighborhood
    MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
    BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
    BP GO:0019222 regulation of metabolic process IEP Neighborhood
    MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
    BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
    BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
    MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
    CC GO:0033643 host cell part IEP Neighborhood
    CC GO:0033646 host intracellular part IEP Neighborhood
    CC GO:0033647 host intracellular organelle IEP Neighborhood
    CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
    CC GO:0042025 host cell nucleus IEP Neighborhood
    CC GO:0044217 other organism part IEP Neighborhood
    BP GO:0050789 regulation of biological process IEP Neighborhood
    BP GO:0050794 regulation of cellular process IEP Neighborhood
    BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
    BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
    BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
    MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
    MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
    BP GO:0065007 biological regulation IEP Neighborhood
    BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
    MF GO:0097159 organic cyclic compound binding IEP Neighborhood
    MF GO:1901363 heterocyclic compound binding IEP Neighborhood
    BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
    BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
    BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
    InterPro domains Description Start Stop
    IPR020683 Ankyrin_rpt-contain_dom 113 183
    IPR020683 Ankyrin_rpt-contain_dom 18 110
    IPR002110 Ankyrin_rpt 196 221
    No external refs found!