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  5. Zm00001e027669_P001

Zm00001e027669_P001


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027669_P001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G73640 RABA6a, AtRABA6a RAB GTPase homolog A6A 0.05 Archaeplastida
AT4G39990 ATRABA4B, ATGB3,... RAB GTPase homolog A4B 0.04 Archaeplastida
GSVIVT01020651001 No alias Ras-related protein RABA1e OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01027396001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.09 Archaeplastida
Gb_03447 No alias A-class RAB GTPase 0.02 Archaeplastida
LOC_Os01g54590.1 No alias A-class RAB GTPase 0.02 Archaeplastida
LOC_Os05g01480.1 No alias A-class RAB GTPase 0.04 Archaeplastida
LOC_Os05g20050.1 No alias A-class RAB GTPase 0.04 Archaeplastida
LOC_Os10g23100.1 No alias A-class RAB GTPase 0.03 Archaeplastida
MA_10428137g0010 No alias A-class RAB GTPase 0.04 Archaeplastida
MA_177507g0010 No alias Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii... 0.02 Archaeplastida
MpVg00760.1 No alias No annotation 0.05 Archaeplastida
Pp3c1_28210V3.1 No alias RAB GTPase homolog A2B 0.03 Archaeplastida
Solyc10g045550.2.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc11g010100.2.1 No alias A-class RAB GTPase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 174
No external refs found!