Description : Polygalacturonase At1g48100 OS=Arabidopsis thaliana (sp|q949z1|pglr4_arath : 300.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 160.1)
Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000636 (LandPlants) Phylogenetic Tree(s): OG_05_0000636_tree ,
OG_06_0001748 (SeedPlants) Phylogenetic Tree(s): OG_06_0001748_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e027720_P001 | |
Cluster | HCCA: Cluster_82 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00197210 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.02 | Archaeplastida | |
AMTR_s00019p00250890 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.03 | Archaeplastida | |
AT1G02460 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT1G05650 | No alias | Pectin lyase-like superfamily protein | 0.07 | Archaeplastida | |
AT1G05660 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
AT1G10640 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT1G60590 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT1G65570 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT1G80170 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT2G43880 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
AT2G43890 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT3G59850 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT4G01890 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT5G14650 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT5G44830 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01013800001 | No alias | Cell wall.pectin.modification and... | 0.05 | Archaeplastida | |
GSVIVT01017305001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
GSVIVT01017644001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
GSVIVT01028132001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
GSVIVT01028189001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01032118001 | No alias | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
GSVIVT01032447001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.07 | Archaeplastida | |
GSVIVT01033362001 | No alias | Cell wall.pectin.modification and... | 0.04 | Archaeplastida | |
GSVIVT01033364001 | No alias | Cell wall.pectin.modification and... | 0.05 | Archaeplastida | |
GSVIVT01038243001 | No alias | Polygalacturonase OS=Prunus persica | 0.02 | Archaeplastida | |
Gb_05788 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Gb_07779 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.03 | Archaeplastida | |
Gb_12018 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | Archaeplastida | |
LOC_Os01g43490.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
LOC_Os01g45060.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
LOC_Os03g11760.1 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.03 | Archaeplastida | |
LOC_Os03g59330.1 | No alias | polygalacturonase (QRT2) | 0.05 | Archaeplastida | |
LOC_Os05g20020.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
LOC_Os05g46510.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | Archaeplastida | |
LOC_Os05g46520.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | Archaeplastida | |
LOC_Os05g50260.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
LOC_Os07g10730.1 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.03 | Archaeplastida | |
LOC_Os11g14410.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
MA_101764g0010 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_127755g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_13282g0010 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.05 | Archaeplastida | |
MA_90135g0010 | No alias | Polygalacturonase OS=Chamaecyparis obtusa... | 0.03 | Archaeplastida | |
Mp3g21140.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Pp3c18_2210V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Smo111266 | No alias | Polygalacturonase OS=Chamaecyparis obtusa | 0.02 | Archaeplastida | |
Smo78038 | No alias | Cell wall.pectin.modification and... | 0.05 | Archaeplastida | |
Solyc01g087280.2.1 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
Solyc02g067630.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc07g015870.4.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc08g014540.1.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
Solyc08g014560.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc12g019120.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc12g019130.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
Solyc12g019180.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
Solyc12g019220.1.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc12g019230.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.05 | Archaeplastida | |
Zm00001e006091_P001 | No alias | polygalacturonase (QRT2) | 0.02 | Archaeplastida | |
Zm00001e006097_P001 | No alias | polygalacturonase (QRT2) | 0.03 | Archaeplastida | |
Zm00001e011814_P002 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.09 | Archaeplastida | |
Zm00001e013553_P001 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Zm00001e032294_P001 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
CC | GO:0005576 | extracellular region | IEP | Neighborhood |
CC | GO:0005618 | cell wall | IEP | Neighborhood |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Neighborhood |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
MF | GO:0008417 | fucosyltransferase activity | IEP | Neighborhood |
BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
BP | GO:0016125 | sterol metabolic process | IEP | Neighborhood |
MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016863 | intramolecular oxidoreductase activity, transposing C=C bonds | IEP | Neighborhood |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Neighborhood |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0047750 | cholestenol delta-isomerase activity | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
CC | GO:0048046 | apoplast | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
No external refs found! |