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  5. Zm00001e027758_P002

Zm00001e027758_P002


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027758_P002
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00066p00183410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.07 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.02 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.04 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.08 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01022120001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
Gb_27869 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g38610.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
MA_10156436g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 330 370
No external refs found!