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  5. Zm00001e027889_P004

Zm00001e027889_P004


Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 418.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 68.4)


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree ,
OG_06_0005547 (SeedPlants) Phylogenetic Tree(s): OG_06_0005547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027889_P004
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00258260 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.07 Archaeplastida
AT3G06770 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT4G23820 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01019516001 No alias Probable polygalacturonase OS=Vitis vinifera 0.05 Archaeplastida
GSVIVT01028057001 No alias Probable polygalacturonase OS=Vitis vinifera 0.05 Archaeplastida
GSVIVT01035089001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
LOC_Os12g36810.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
MA_10435166g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436451g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g009790.4.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Solyc07g042160.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 140 419
No external refs found!