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  5. Zm00001e027951_P001

Zm00001e027951_P001


Description : component MIP2 of DSL1 (Depends-on-SLY1) complex


Gene families : OG0004940 (Archaeplastida) Phylogenetic Tree(s): OG0004940_tree ,
OG_05_0007713 (LandPlants) Phylogenetic Tree(s): OG_05_0007713_tree ,
OG_06_0006392 (SeedPlants) Phylogenetic Tree(s): OG_06_0006392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027951_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00267270 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00004p00267320 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.DSL1... 0.03 Archaeplastida
AT5G24350 No alias CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39... 0.07 Archaeplastida
GSVIVT01038603001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.04 Archaeplastida
Gb_24496 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.09 Archaeplastida
MA_10437135g0010 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.09 Archaeplastida
MA_10437234g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_178977g0010 No alias MAG2-interacting protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_37482g0010 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.05 Archaeplastida
Smo438861 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.04 Archaeplastida
Solyc03g082680.4.1 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR013244 Sec39_domain 597 1260
No external refs found!