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Zm00001e028087_P001


Description : RING-v-class E3 ligase


Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0014151 (LandPlants) Phylogenetic Tree(s): OG_05_0014151_tree ,
OG_06_0014064 (SeedPlants) Phylogenetic Tree(s): OG_06_0014064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028087_P001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g49280.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
LOC_Os05g47900.1 No alias RING-v-class E3 ligase 0.1 Archaeplastida
Smo420592 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc02g091230.4.1 No alias RING-v-class E3 ligase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 68 113
IPR022143 DUF3675 119 227
No external refs found!