Zm00001e028142_P001

Description : RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana (sp|o65155|kelp_arath : 111.0)

Gene families : OG0001698 (Archaeplastida) Phylogenetic Tree(s): OG0001698_tree ,
OG_05_0001544 (LandPlants) Phylogenetic Tree(s): OG_05_0001544_tree ,
OG_06_0001508 (SeedPlants) Phylogenetic Tree(s): OG_06_0001508_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e028142_P001
Cluster	HCCA: Cluster_367

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g34840.1	No alias	RNA polymerase II transcriptional coactivator KIWI...	0.03	Archaeplastida
Mp2g17130.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp3g16130.1	No alias	RNA polymerase II transcriptional coactivator KELP...	0.04	Archaeplastida
Pp3c7_24660V3.1	No alias	ssDNA-binding transcriptional regulator	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0000976	transcription regulatory region sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0001012	RNA polymerase II regulatory region DNA binding	IEP	Neighborhood
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
CC	GO:0016272	prefoldin complex	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
MF	GO:0032422	purine-rich negative regulatory element binding	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR014876	DEK_C	5	59
IPR003173	PC4	117	167

External Links

No external refs found!

Zm00001e028142_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation