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  5. Zm00001e028202_P001

Zm00001e028202_P001


Description : Senescence/dehydration-associated protein At4g35985, chloroplastic OS=Arabidopsis thaliana (sp|f4jnx2|sdeh4_arath : 218.0)


Gene families : OG0000668 (Archaeplastida) Phylogenetic Tree(s): OG0000668_tree ,
OG_05_0000954 (LandPlants) Phylogenetic Tree(s): OG_05_0000954_tree ,
OG_06_0002317 (SeedPlants) Phylogenetic Tree(s): OG_06_0002317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028202_P001
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00140490 evm_27.TU.AmTr_v1... Senescence/dehydration-associated protein At4g35985,... 0.06 Archaeplastida
AMTR_s00056p00140820 evm_27.TU.AmTr_v1... Senescence/dehydration-associated protein At4g35985,... 0.06 Archaeplastida
AT3G21600 No alias Senescence/dehydration-associated protein-related 0.05 Archaeplastida
GSVIVT01015304001 No alias Senescence/dehydration-associated protein At4g35985,... 0.02 Archaeplastida
LOC_Os01g52480.1 No alias Senescence/dehydration-associated protein At4g35985,... 0.06 Archaeplastida
MA_114968g0010 No alias Senescence/dehydration-associated protein At3g51250... 0.03 Archaeplastida
MA_186639g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_460372g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8979358g0010 No alias Senescence/dehydration-associated protein At4g35985,... 0.04 Archaeplastida
Pp3c22_6990V3.1 No alias Senescence/dehydration-associated protein-related 0.04 Archaeplastida
Solyc12g008460.2.1 No alias Senescence/dehydration-associated protein At4g35985,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009686 Senescence/spartin 181 360
No external refs found!