Zm00001e028277_P001

Description : YKT6-type R-type SNARE longin protein

Gene families : OG0003416 (Archaeplastida) Phylogenetic Tree(s): OG0003416_tree ,
OG_05_0003992 (LandPlants) Phylogenetic Tree(s): OG_05_0003992_tree ,
OG_06_0005540 (SeedPlants) Phylogenetic Tree(s): OG_06_0005540_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e028277_P001
Cluster	HCCA: Cluster_204

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00013p00210840	evm_27.TU.AmTr_v1...	Vesicle trafficking.SNARE target membrane recognition...	0.02	Archaeplastida
AMTR_s00053p00105350	evm_27.TU.AmTr_v1...	VAMP-like protein YKT61 OS=Arabidopsis thaliana	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001388	Synaptobrevin	148	204
IPR010908	Longin_dom	67	124

External Links

No external refs found!