Description : transcription factor (SRS)
Gene families : OG0001199 (Archaeplastida) Phylogenetic Tree(s): OG0001199_tree ,
OG_05_0000755 (LandPlants) Phylogenetic Tree(s): OG_05_0000755_tree ,
OG_06_0000578 (SeedPlants) Phylogenetic Tree(s): OG_06_0000578_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e028304_P001 | |
Cluster | HCCA: Cluster_69 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G75520 | SRS5 | SHI-related sequence 5 | 0.04 | Archaeplastida | |
AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.07 | Archaeplastida | |
AT4G36260 | SRS2, STY2 | Lateral root primordium (LRP) protein-related | 0.04 | Archaeplastida | |
AT5G12330 | LRP1 | Lateral root primordium (LRP) protein-related | 0.07 | Archaeplastida | |
AT5G66350 | SHI | Lateral root primordium (LRP) protein-related | 0.05 | Archaeplastida | |
GSVIVT01009812001 | No alias | RNA biosynthesis.transcriptional activation.SRS... | 0.06 | Archaeplastida | |
LOC_Os01g72490.1 | No alias | transcription factor (SRS) | 0.02 | Archaeplastida | |
LOC_Os05g32070.1 | No alias | transcription factor (SRS) | 0.07 | Archaeplastida | |
LOC_Os06g49830.1 | No alias | transcription factor (SRS) | 0.07 | Archaeplastida | |
LOC_Os08g43410.1 | No alias | transcription factor (SRS) | 0.05 | Archaeplastida | |
LOC_Os09g36160.1 | No alias | transcription factor (SRS) | 0.04 | Archaeplastida | |
Mp3g19510.1 | No alias | transcription factor (SRS) | 0.05 | Archaeplastida | |
Pp3c18_8920V3.1 | No alias | Lateral root primordium (LRP) protein-related | 0.04 | Archaeplastida | |
Solyc02g084680.3.1 | No alias | transcription factor (SRS) | 0.04 | Archaeplastida | |
Solyc04g080970.4.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Solyc11g064800.3.1 | No alias | transcription factor (SRS) | 0.05 | Archaeplastida | |
Zm00001e010227_P001 | No alias | transcription factor (SRS) | 0.06 | Archaeplastida | |
Zm00001e013256_P002 | No alias | transcription factor (SRS) | 0.05 | Archaeplastida | |
Zm00001e030189_P001 | No alias | transcription factor (SRS) | 0.06 | Archaeplastida | |
Zm00001e031567_P001 | No alias | transcription factor (SRS) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006811 | ion transport | IEP | Neighborhood |
BP | GO:0006812 | cation transport | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |