1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e028371_P001

Zm00001e028371_P001


Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0001600 (Archaeplastida) Phylogenetic Tree(s): OG0001600_tree ,
OG_05_0001405 (LandPlants) Phylogenetic Tree(s): OG_05_0001405_tree ,
OG_06_0001795 (SeedPlants) Phylogenetic Tree(s): OG_06_0001795_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028371_P001
Cluster HCCA: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
Cre10.g425750 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.01 Archaeplastida
GSVIVT01010945001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.04 Archaeplastida
LOC_Os01g07400.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.07 Archaeplastida
Mp1g05420.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.01 Archaeplastida
Solyc06g048510.4.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 261 289
IPR001680 WD40_repeat 307 338
No external refs found!