Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0002311 (SeedPlants) Phylogenetic Tree(s): OG_06_0002311_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e028396_P001 | |
Cluster | HCCA: Cluster_367 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00157690 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
AMTR_s00148p00046020 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.03 | Archaeplastida | |
AT1G59750 | ARF1 | auxin response factor 1 | 0.03 | Archaeplastida | |
AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.04 | Archaeplastida | |
AT3G61830 | ARF18 | auxin response factor 18 | 0.03 | Archaeplastida | |
AT4G23980 | ARF9 | auxin response factor 9 | 0.02 | Archaeplastida | |
GSVIVT01004942001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
GSVIVT01011008001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01021552001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
GSVIVT01021553001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01023149001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01027166001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01032251001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01035204001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
Gb_12414 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Gb_18738 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_23186 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_32864 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Gb_33804 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os01g48060.1 | No alias | transcription factor (ARF) | 0.08 | Archaeplastida | |
LOC_Os01g70270.1 | No alias | transcription factor (ARF) | 0.08 | Archaeplastida | |
LOC_Os04g36054.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os04g57610.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os11g32110.1 | No alias | transcription factor (ARF) | 0.11 | Archaeplastida | |
LOC_Os12g29520.1 | No alias | transcription factor (ARF) | 0.12 | Archaeplastida | |
MA_10022392g0010 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
MA_10432580g0010 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
MA_55076g0010 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_85955g0020 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Mp1g12750.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
Pp3c14_16990V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Solyc01g103050.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc04g081240.2.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e003229_P002 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e006577_P003 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e006640_P002 | No alias | transcription factor (ARF) | 0.1 | Archaeplastida | |
Zm00001e018126_P002 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e032135_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
No external refs found! |