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  5. Zm00001e028425_P003

Zm00001e028425_P003


Description : regulatory component VPS30/ATG6 of PI3-kinase vesicle nucleation complex I/II


Gene families : OG0003777 (Archaeplastida) Phylogenetic Tree(s): OG0003777_tree ,
OG_05_0004314 (LandPlants) Phylogenetic Tree(s): OG_05_0004314_tree ,
OG_06_0004359 (SeedPlants) Phylogenetic Tree(s): OG_06_0004359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028425_P003
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g44200.1 No alias regulatory component VPS30/ATG6 of PI3-kinase vesicle... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!