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  5. Zm00001e028426_P001

Zm00001e028426_P001


Description : transcription factor (TCP). TCP20 circadian clock activation factor


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028426_P001
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.03 Archaeplastida
AT3G45150 TCP16 TCP domain protein 16 0.02 Archaeplastida
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.04 Archaeplastida
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
LOC_Os01g69980.1 No alias transcription factor (TCP). TCP20 circadian clock... 0.02 Archaeplastida
LOC_Os02g51280.1 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_10428794g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_81710g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc02g068200.1.1 No alias transcription factor (TCP). TCP20 circadian clock... 0.02 Archaeplastida
Solyc09g008030.1.1 No alias transcription factor (TCP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 91 160
No external refs found!