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  5. Zm00001e028431_P003

Zm00001e028431_P003


Description : component psRPL27 of large ribosomal subunit proteome


Gene families : OG0001767 (Archaeplastida) Phylogenetic Tree(s): OG0001767_tree ,
OG_05_0007646 (LandPlants) Phylogenetic Tree(s): OG_05_0007646_tree ,
OG_06_0009877 (SeedPlants) Phylogenetic Tree(s): OG_06_0009877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028431_P003
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00039290 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.06 Archaeplastida
AT5G40950 RPL27 ribosomal protein large subunit 27 0.18 Archaeplastida
Cpa|evm.model.tig00021428.4 No alias 50S ribosomal protein L27, chloroplastic OS=Nicotiana tabacum 0.01 Archaeplastida
Cpa|evm.model.tig00022075.47 No alias 50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea 0.01 Archaeplastida
Cre06.g300800 No alias 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana 0.14 Archaeplastida
GSVIVT01033086001 No alias Protein biosynthesis.organelle translation... 0.13 Archaeplastida
Gb_27573 No alias component psRPL27 of large ribosomal subunit proteome 0.08 Archaeplastida
LOC_Os01g69950.1 No alias component psRPL27 of large ribosomal subunit proteome 0.18 Archaeplastida
MA_19490g0010 No alias component psRPL27 of large ribosomal subunit proteome 0.08 Archaeplastida
Mp5g06170.1 No alias component psRPL27 of large ribosomal subunit proteome 0.19 Archaeplastida
Pp3c18_9840V3.1 No alias ribosomal protein large subunit 27 0.24 Archaeplastida
Pp3c19_19080V3.1 No alias Ribosomal protein L27 family protein 0.02 Archaeplastida
Pp3c21_16170V3.1 No alias ribosomal protein large subunit 27 0.19 Archaeplastida
Smo159042 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Solyc11g068820.3.1 No alias component psRPL27 of large ribosomal subunit proteome 0.13 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008883 glutamyl-tRNA reductase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 56 135
No external refs found!