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  5. Zm00001e028442_P002

Zm00001e028442_P002


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028442_P002
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.03 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.02 Archaeplastida
Cre02.g104700 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
Cre02.g112750 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Cre10.g433350 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Gb_22010 No alias transcription factor (SBP) 0.04 Archaeplastida
Gb_23724 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_37539 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_38013 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_38014 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_41517 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os04g56170.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os06g44860.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os08g41940.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os09g31438.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os11g30370.1 No alias transcription factor (SBP) 0.06 Archaeplastida
MA_10049111g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c12_24350V3.1 No alias squamosa promoter binding protein-like 8 0.03 Archaeplastida
Pp3c16_7540V3.1 No alias squamosa promoter binding protein-like 8 0.04 Archaeplastida
Pp3c4_6000V3.1 No alias squamosa promoter binding protein-like 8 0.04 Archaeplastida
Pp3c5_22750V3.1 No alias squamosa promoter binding protein-like 8 0.03 Archaeplastida
Pp3c6_6900V3.1 No alias squamosa promoter binding protein-like 8 0.04 Archaeplastida
Smo79699 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc05g053240.4.1 No alias transcription factor (SBP) 0.07 Archaeplastida
Solyc07g062980.4.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009093_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013198_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e018817_P003 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e021425_P001 No alias transcription factor (SBP) 0.06 Archaeplastida
Zm00001e025128_P001 No alias transcription factor (SBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 81 154
No external refs found!