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  5. Zm00001e028521_P002

Zm00001e028521_P002


Description : RING-HC-class E3 ligase. ligating E3 protein (RGLG)


Gene families : OG0000512 (Archaeplastida) Phylogenetic Tree(s): OG0000512_tree ,
OG_05_0000782 (LandPlants) Phylogenetic Tree(s): OG_05_0000782_tree ,
OG_06_0000626 (SeedPlants) Phylogenetic Tree(s): OG_06_0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028521_P002
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00153250 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00061p00153710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G67800 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.05 Archaeplastida
Cpa|evm.model.tig00020614.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Cre09.g399550 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01032380001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
LOC_Os01g68060.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.05 Archaeplastida
LOC_Os06g40650.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.03 Archaeplastida
LOC_Os12g19030.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.08 Archaeplastida
Pp3c24_14440V3.1 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.03 Archaeplastida
Pp3c2_13880V3.1 No alias RING domain ligase1 0.03 Archaeplastida
Smo148275 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc05g053870.3.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010734 Copine 159 373
No external refs found!