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  5. Zm00001e028673_P001

Zm00001e028673_P001


Description : no hits & (original description: none)


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000104 (LandPlants) Phylogenetic Tree(s): OG_05_0000104_tree ,
OG_06_0017424 (SeedPlants) Phylogenetic Tree(s): OG_06_0017424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028673_P001
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00210920 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00030p00215650 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00140p00027980 evm_27.TU.AmTr_v1... Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00171p00061900 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT2G35980 NHL10, YLS9, ATNHL10 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT5G06320 NHL3 NDR1/HIN1-like 3 0.07 Archaeplastida
AT5G06330 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
AT5G36970 NHL25 NDR1/HIN1-like 25 0.02 Archaeplastida
GSVIVT01033199001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_01957 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_26587 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_26590 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os01g59680.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os01g64450.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g33990.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g58090.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os04g58850.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g58860.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g01220.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g09460.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g39970.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g05860.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g03370.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10429254g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10432342g0010 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432342g0020 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_180376g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_3652531g0010 No alias No annotation 0.03 Archaeplastida
MA_44394g0020 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_63890g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_71979g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_722404g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_86810g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g02160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g19340.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c10_5660V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
Pp3c12_2240V3.1 No alias NDR1/HIN1-like 3 0.04 Archaeplastida
Pp3c13_23080V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.06 Archaeplastida
Pp3c4_22140V3.1 No alias NDR1/HIN1-like 25 0.02 Archaeplastida
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g036480.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g019920.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g005040.4.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g081970.2.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g081980.2.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc10g150145.1.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004504_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015371_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e019498_P001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e020501_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024292_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035148_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e039408_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e040847_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041974_P001 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041977_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 120 218
No external refs found!