Zm00001e028905_P001

Description : Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana (sp|o22197|rhc1a_arath : 192.0)

Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0017416 (SeedPlants) Phylogenetic Tree(s): OG_06_0017416_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e028905_P001
Cluster	HCCA: Cluster_305

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01037379001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.05	Archaeplastida
Gb_40322	No alias	AIP2 signal transducer of abscisic acid perception	0.03	Archaeplastida
LOC_Os03g22830.2	No alias	Probable E3 ubiquitin-protein ligase RHC1A...	0.03	Archaeplastida
MA_10428335g0020	No alias	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum...	0.03	Archaeplastida
Mp7g04520.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c13_21890V3.1	No alias	RING-H2 finger C1A	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	189	231

External Links

No external refs found!