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  5. Zm00001e029246_P001

Zm00001e029246_P001


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001977 (SeedPlants) Phylogenetic Tree(s): OG_06_0001977_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029246_P001
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
AT1G02310 MAN1 Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
GSVIVT01030165001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.06 Archaeplastida
LOC_Os01g54300.1 No alias endo-beta-1,4-mannanase 0.07 Archaeplastida
LOC_Os05g25480.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_10433157g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
Solyc01g008720.2.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Solyc04g080620.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc10g074920.2.1 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 82 293
No external refs found!