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  5. Zm00001e029280_P001

Zm00001e029280_P001


Description : Uncharacterized protein At4g37920 OS=Arabidopsis thaliana (sp|q84wn0|y4920_arath : 404.0)


Gene families : OG0002455 (Archaeplastida) Phylogenetic Tree(s): OG0002455_tree ,
OG_05_0002243 (LandPlants) Phylogenetic Tree(s): OG_05_0002243_tree ,
OG_06_0002278 (SeedPlants) Phylogenetic Tree(s): OG_06_0002278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029280_P001
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00227230 evm_27.TU.AmTr_v1... Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G36320 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
AT4G37920 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 Archaeplastida
GSVIVT01003846001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01006768001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01008964001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os01g20110.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.11 Archaeplastida
MA_77650g0010 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.03 Archaeplastida
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c11_3060V3.1 No alias No annotation 0.03 Archaeplastida
Smo77953 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g091640.3.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.05 Archaeplastida
Solyc04g072400.4.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!